BackgroundPreprint usage is growing rapidly in the life sciences; however, questions remain on the relative quality of preprints when compared to published articles. An objective dimension of quality that is readily measurable is completeness of reporting, as transparency can improve the reader’s ability to independently interpret data and reproduce findings.MethodsIn this observational study, we initially compared independent samples of articles published in bioRxiv and in PubMed-indexed journals in 2016 using a quality of reporting questionnaire. After that, we performed paired comparisons (...) between preprints from bioRxiv to their own peer-reviewed versions in journals.ResultsPeer-reviewed articles had, on average, higher quality of reporting than preprints, although the difference was small, with absolute differences of 5.0% [95% CI 1.4, 8.6] and 4.7% [95% CI 2.4, 7.0] of reported items in the independent samples and paired sample comparison, respectively. There were larger differences favoring peer-reviewed articles in subjective ratings of how clearly titles and abstracts presented the main findings and how easy it was to locate relevant reporting information. Changes in reporting from preprints to peer-reviewed versions did not correlate with the impact factor of the publication venue or with the time lag from bioRxiv to journal publication.ConclusionsOur results suggest that, on average, publication in a peer-reviewed journal is associated with improvement in quality of reporting. They also show that quality of reporting in preprints in the life sciences is within a similar range as that of peer-reviewed articles, albeit slightly lower on average, supporting the idea that preprints should be considered valid scientific contributions. (shrink)

Plagiarism is a serious, yet widespread type of research misconduct, and is often neglected in developing countries. Despite its far-reaching implications, plagiarism is poorly acknowledged and discussed in the academic setting, and insufficient evidence exists in Latin America and developing countries to inform the development of preventive strategies. In this context, we present a longitudinal case study of seven instances of plagiarism and cheating arising in four consecutive classes of an Epidemiology Masters program in Lima, Peru, and describes the implementation (...) and outcomes of a multifaceted, “zero-tolerance” policy aimed at introducing research integrity. Two cases involved cheating in graded assignments, and five cases correspond to plagiarism in the thesis protocol. Cases revealed poor awareness of high tolerance to plagiarism, poor academic performance, and widespread writing deficiencies, compensated with patchwriting and copy-pasting. Depending on the events’ severity, penalties included course failure and separation from the program. Students at fault did not engage in further plagiarism. Between 2011 and 2013, the Masters program sequentially introduced a preventive policy consisting of: intensified research integrity and scientific writing education, a stepwise, cumulative writing process; honor codes; active search for plagiarism in all academic products; and a “zero-tolerance” policy in response to documented cases. No cases were detected in 2014. In conclusion, plagiarism seems to be widespread in resource-limited settings and a greater response with educational and zero-tolerance components is needed to prevent it. (shrink)

“Tell me," Wittgenstein once asked a friend, "why do people always say, it was natural for man to assume that the sun went round the earth rather than that the earth was rotating?" His friend replied, "Well, obviously because it just looks as though the Sun is going round the Earth." Wittgenstein replied, "Well, what would it have looked like if it had looked as though the Earth was rotating?” What would it have looked like if we looked at all (...) sciences from the viewpoint of Wittgenstein’s philosophy? Wittgenstein is undoubtedly one of the most influential philosophers of the twentieth century. His complex body of work has been analysed by numerous scholars, from mathematicians and physicists, to philosophers, linguists, and beyond. This volume brings together some of his central perspectives as applied to the modern sciences and studies the influence they may have on the thought processes underlying science and on the world view it engenders. The contributions stem from leading scholars in philosophy, mathematics, physics, economics, psychology and human sciences; all of them have written in an accessible style that demands little specialist knowledge, whilst clearly portraying and discussing the deep issues at hand. (shrink)

Bernardi Perini, G. Aceto italico e poesia luciliana: Hor. Sat. I 7.--Bernardinello, S. Bessarione riassume la Fisica di Aristotele.--Bottecchia, M. E. I Mechanicha di Aristotele nel Parisinus graecus 2507.--Bottin, L. La tradizione araba della Retorica di Aristotele e il problema dell'exemplar decurtatum.--Chiereghin, F. Analogie di struttura tra la metodologia della storiografia filosofica di Platone e di Kant.--Ciani, M. G. Poesia come enigma.--Degani, E. Hippon. fr. 40 Med.--Donaldi, F. Note preparatorie all'edizione dell'Encomio di Elena gorgiano nella traduzione latina inedita di Pietro (...) Bembo.--Fumarola, V. Euripide e la tetralogia della femminilità.--Gentilini, A. Una consolatoria inedita del Bessarione.--Ghinatti, F. I culti greci di Paestum.--Longo, O. Note all'Elena e alle Nuvole.--Lunelli, A. Solis rota.--Meschini, A. Su alcuni luoghi del Reso.--Mignucci, M. In margine al concetto aristotelico di esistenza.--Mioni, E. L'Antologia greca da Massimo Planude a Marco Musuro.--Pianezzola, E. Haurio=ferio, perfodio. Un calco omerico mediato dagli scolii.--Pontani, F. M. La distruzione di Melos di Ghiannis Ritsos.--Rinaldi Mioni, G. Aspetto verbale nel greco classico e strutturalismo.--Riondato, E. Problematicità semantica ed etica nell'Etica a Nicomaco.--Serra, G. Alcune osservazioni sulle traduzioni dall'arabo in ebraico e in latino del De generatione et corruptione di Aristotele e dello pseudo-aristotelico Liber de causis.--Traina, A. Convexo nutantem pondere mundum (Verg. Ecl. 4,50).--Valentini, R. La reintroduzione dell'onciale e la datazione dei manoscritti greci in minuscola. (shrink)

For arbitrary finite group $G$ and countable Dedekind domain $R$ such that the residue field $R/P$ is finite for every maximal $R$ -ideal $P$ , we show that the localizations at every maximal ideal of two $RG$ -lattices are isomorphic if and only if the two lattices satisfy the same first order sentences. Then we investigate generalizations of the above results to arbitrary $R$ -torsion-free $RG$ -modules and we apply the previous results to show the decidability of the theory of (...) ${\vec Z}C(2)^2$ -lattices. Eventually, we show that ${\vec Z} [i] C(2)^2$ -lattices have undecidable theory. (shrink)

Our aim in this paper is to analyse the possibilities of a logical or epistemological equivalence between the projets of R. Dedekind and G. Frege for the foundations of arithmetic. It is well know that both of them have a “logicist” point of vew. But we think that even if some coincidences exist in the wa y they define the main concepts of arithmetic, some important differences remain.

Our aim in this paper is to analyse the possibilities of a logical or epistemological equivalence between the projets of R. Dedekind and G. Frege for the foundations of arithmetic. It is well know that both of them have a “logicist” point of vew. But we think that even if some coincidences exist in the wa y they define the main concepts of arithmetic, some important differences remain.

We consider R-torsionfree modules over group rings RG, where R is a Dedekind domain and G is a finite group. In the first part of the paper [4] we compared the theory T of all R-torsionfree RG-modules and the theory T0 of RG-lattices , and we realized that they are almost always different. Now we compare their behaviour with respect to decidability, when RG-lattices are of finite, or wild representation type.

In the 1970s, R.D. MacElroy coined the term ‘extremophile’ to describe microorganisms that thrive under extreme conditions (MacElroy 1974). This hybrid word transliterates to ‘love of extremes’ and has been studied as a straightforward concept for the past 40 years. In this paper, we discuss several ways the term has been understood in the scientific literature, each of which has different consequences for the distribution and importance of extremophiles. They are, briefly, Human-Centric, at the Edge of life’s habitation of Morphospace, (...) by appeal to Statistical Rarity, described by Objective Limits, and at the Limits of Impossibility for metabolic processes. Importantly, these concepts have co-existed, unacknowledged and conflated, for decades. Confusion and equivocation threaten to follow from the wildly varied inclusion or exclusion of organisms as extremophiles depending on the concept used. Under some conceptions, entire kinds of extremophiles become meaningless. Since our understanding of how life works is shaped by what we take to be its extremes, clarifying extremophily is key for many large-scale projects in biology, ecology, biotechnology and astrobiology. In what follows, we proceed as if a noncontroversial account of life is possible and that it is possible to find complex chemistry in the Universe that is similar enough to Life on Earth such that both may be considered instances of ‘life’ (but see Mariscal & Doolittle 2018). We raise, but do not address, the questions of whether the distribution of Life on Earth is representative of what we may find elsewhere in the Universe, whether the same kinds of extremophiles would exist given a replay of the tape of life. Additionally, each of these concepts assumes life based on some sort of biochemistry in this universe, effectively setting aside claims made by some artificial life proponents that their digital organisms are genuine examples of life (Langton 1989, Ray 1995). On the distinction between extremophilic and extremotolerant, we note that all accounts accept the latter as a broader category than the former, since ‘phily’ means love and tolerance is a prerequisite for love under any conception. Indeed, there will be many extremely impoverished environments where tolerance is the only option and thriving is precluded, e.g. Bacillus marismortui was extracted and grown from 250-million-year-old salt crystals in the Permian Salado Formation in an inactive yet persistent state (Vreeland et al., 2000). We also note that extremophily, as a functional category, is potentially applicable at many levels of the biological hierarchy. Extremophily at one level does not necessarily extend to higher and lower levels. For instance, a microorganism in isolation might be quite intolerant to certain environmental conditions yet flourish when subjected to the same conditions as a community or natural biofilm. Alternatively, a protein molecule might be quite stable or active under certain conditions even if the optimal environment for the organism containing it is far more mesophilic. There is an industry of artificially selecting organisms and proteins to adapt to extreme environments (see van den Burg & Eijsink 2002), providing some justification to consider ‘functioning at extremes’ as a worthwhile category of investigation. Finally, we also note certain physico-chemical ranges are rarely considered with respect to extremophily – timespan, size, nutrient availability (Hoehler & Jørgensen 2013), etc. – as well as some biological parameters – abundance, isolation, competition, etc. Perhaps scientific interest must also come into play as to the reason these criteria are not considered relevant. We return to this issue later. In the next section, we give five definitions of extremophily, show their benefits, drawbacks, and unintended yet unavoidable consequences. These arguments are summarized in Table 1 and represented visually in Figures 1 and 2. Given research on polyextremophiles, it seems Figure 2 is a more plausible representation of the state of current knowledge than Figure 1 (Harrison et al. 2013). Life is patchily distributed across various dimensions, which may reflect its contingent history, poor sampling, or (perhaps) fundamental limits. Figure 3 shows the conceptual flowchart for all of these views. In the following section, we take a step back to ask whether we should choose between these definitions and how such a judgment could be made. We argue for a limited pluralism, in which some, but not all, of the concepts are acceptable relative to certain practical and theoretical aims. (shrink)

In the last two decades the growth of economic inequalities in Latin America has increased with unprecedented speed. Strategically the advance of neoclassical economic orthodoxy on Latin American, posed the issue in terms that it was their autochthonous economic Ideas (”structuralism”) the real cul..

We consider R-torsionfree modules over group rings RG, where R is a Dedekind domain and G is a finite group. In the first part of the paper [4] we compared the theory T of all R-torsionfree RG-modules and the theory T0 of RG-lattices , and we realized that they are almost always different. Now we compare their behaviour with respect to decidability, when RG-lattices are of finite, or wild representation type.

This treatise on aesthetics criticizes various psychological theories of art, offers new theories and interpretations, and draws important inferences concerning ...

What is science? How is scientific knowledge affected by the society that produces it? Does scientific knowledge directly correspond to reality? Can we draw a line between science and pseudo-science? Will it ever be possible for computers to undertake scientific investigation independently? Is there such a thing as feminist science? In this book the author addresses questions such as these using a technique of 'cognitive play', which creates and explores new links between the ideas and results of contemporary history, philosophy, (...) and sociology of science. New ideas and approaches are applied to a wide range of case studies, many of them from controversial and contested science. This book will be of interest to historians and sociologists of science, to anyone interested in science studies, and to educated general readers with an interest in the history, philosophy, and social context of science. (shrink)

This early work by Robin G. Collingwood was originally published in 1939 and we are now republishing it with a brand new introductory biography. 'An Autobiography' is the story of Collingwood's personal and academic life. Robin George Collingwood was born on 22nd February 1889, in Cartmel, England. He was the son of author, artist, and academic, W. G. Collingwood. He was greatly influenced by the Italian Idealists Croce, Gentile, and Guido de Ruggiero. Another important influence was his father, a professor (...) of fine art and a student of Ruskin. He published many works of philosophy, such as Speculum Mentis (1924), An Essay on Philosophic Method (1933), and An Essay on Metaphysics (1940). (shrink)

Of these lines Markland wrote in 1728 ‘patet ignari cuiusdam et barbari interpolatoris esse’; Dr. Trapp in 1735 found them ‘in themselves flat, and improper, and altogether unworthy of Virgil’; ‘in his ipsis miror qui factum sit ut Viri Doctissimi non agnouerint orationis uim et elegantiam’ ; ‘finding in them … all Virgil's usual ease and suavity … [we] hail those verses with joy, and reinstate them in their rightful … position as the commencing verses of the great Roman epic’ (...) ; ‘uersus praeclarissimos iniuria poeta abiudicauerunt editores plerique’. (shrink)

The distinction between propositional and doxastic justification has been of undisputed theoretical importance in a wide range of contemporary epistemological debates. Yet there are a host of intimately related issues that have rarely been discussed in connection with this distinction. For instance, the distinction not only applies to an individual’s beliefs, but also to group beliefs and to various other attitudes that both groups and individuals can take: credence, commitment, suspension, faith, and hope. Moreover, discussions of propositional and doxastic justification (...) have rarely focused on broader meta-epistemological issues, and yet meta-epistemological positions can have important implications for first-order views about this distinction. This volume addresses these and other issues by bringing together 16 essays that advance the state-of-the-art thinking on propositional and doxastic justification and explore how such thinking shapes and is shaped by a range of issues previously neglected in contemporary epistemology. (shrink)